ESHG 2008 - Concurrent Sessions C01-C05

Sunday, June 1, 2008
Concurrent Sessions C01 - C05

 

* ESHG Young Investigator Award candidates - Profiles available here

15.00 - 16.30 C01 Clinical Genetics I C02 Molecular and biochemical basis of disease - Skeletal dysplasia and cardiovascular defects C03 Genetic analysis, linkage, and association C04 Molecular Cytogenetics C05 Genomics, technology, bioinformatics
15.00

C01.1* Clinical and molecular characteristics of 1qter syndrome: Delineating a critical region for corpus callosum agenesis/hypogenesis
B. W. M. van Bon
1, D. A. Koolen1, R. Borgatti2, A. Magee3, S. Garcia-Minaur4, L. Rooms5, W. Reardon6, M. Zollino7, M. C. Bonaglia2, M. De Gregori8, F. Novara8, R. Grasso2, R. Ciccone8, H. A. van Duyvenvoorde9, R. Guerrini10, E. Fazzi11, S. G. Kant9, C. L. Marcelis1, R. Pfundt1, N. de Leeuw1, B. C. Hamel1, H. G. Brunner1, F. Kooy5, O. Zuffardi8, B. B. A. de Vries1;
1Radboud University Nijmegen Medical Centre, Nijmegen, The Netherlands, 2IRCCS Eugenio Medea La Nostra Famiglia, Lecco, Italy, 3Northern Ireland Regional Genetics Service, Belfast, Ireland, 4South East of Scotland Clinical Genetic Service, Edinburgh, United Kingdom, 5University of Antwerp, Antwerp, Belgium, 6National Centre for Medical Genetics, Dublin, Ireland, 7Università Cattolica Sacro Cuore, Roma, Italy, 8Università di Pavia, Pavia, Italy, 9Leiden University Medical Centre, Leiden, The Netherlands, 10Azienda Ospedaliero-Universitaria A. Meyer, Firenze, Italy, 11IRCCS C. Mondino Institute, Pavia, Italy.

C02.1* Fas-associated factor-1, a protein involved in apoptosis, causes cleft lip and palate
M. Ghassibe
1, L. Desmyter2, F. Claes3,4, O. Boute5, B. Bayet6, P. Pellerin7, L. Backx8, K. Hermans3,4, P. Brouillard1, N. Revencu1, R. Vanwijck6, J. R. Vermeesch8, H. A. Poirel1,9, P. Carmeliet3,4, M. Vikkula1;
1Laboratory of Human Genetics, de Duve Institute, Brussels, Belgium, 2Laboratory of Human Genetics, de Duve Institute, université catholique de Louvain, Brussels, Belgium, 3Department for Transgene Technology and Gene Therapy, VIB, Leuven, Belgium, 4Center for Transgene Technology and Gene Therapy (CTG), K.U.Leuven, Leuven, Belgium, 5Centre de Génétique, CHU de Lille, Lille, France, 6Centre Labiopalatin, Service de Chirurgie Plastique, Cliniques universitaires Saint-Luc, Brussels, Belgium, 7Service de Chirurgie Plastique et Reconstructive, CHU de Lille, Lille, France, 8Center for Human Genetics, Leuven University Hospital, Leuven, Belgium, 9Center for Human Genetics, Cliniques universitaires Saint-Luc, Université catholique de Louvain, Brussels, Belgium.

C03.1* Mitochondrial complex 3 deficiency associated with homozygous mutation in UQCRQ, encoding ubiquinol - cytochrome c reductase, complex III subunit VII, 9.5kDa
O. Barel
1, Z. Shorer2, H. Flusser2, R. Ofir1, G. Narkis1, G. Finer1, H. Shalev2, A. Nasasra1, O. S. Birk1,2;
1National Institute for Biotechnology in the Negev, Beer-sheva, Israel, 2Soroka Medical Center, Beer-sheva, Israel.

C04.1* Copy number variations in patients with overgrowth syndromes detected by array-CGH
V. Malan
1,2, V. Cormier-Daire1,2, S. Chevallier1, C. Coubes3, D. Lacombe4, L. Pasquier5, J. Soulier6, N. Morichon-Delvallez1,2, M. Vekemans1,2, A. Munnich1,2, L. Colleaux1,2;
1Departement de Génétique et INSERM U781, Paris, France, 2Université Paris Descartes, Paris, France, 3CHU Hôpital Saint-Eloi, Montpellier, France, 4Service de Génétique Médicale, Centre Hospitalier Universitaire Pellegrin, Bordeaux, France, 5Unité de Génétique Clinique, Hôpital Sud, Rennes, France, 6Laboratoire d'Hématologie, Hôpital Saint-Louis, Paris, France.

C05.1 Functional interactions of conserved non-coding (CNC) sequences with other CNC using circular chromosome conformation capture (4C)
D. Robyr
, G. Duriaux-Sail, S. E. Antonarakis;
University of Geneva Medical School, Geneva, Switzerland.

 

15.15

C01.2 Submicroscopic duplications of the hydroxysteroid dehydrogenase HSD17B10 and the E3 ubiquitin ligase HUWE1 are associated with mental retardation
G. Froyen
1, M. Corbett2, J. Vandewalle1, I. Jarvela3, O. Lawrence4, M. Bauters1, H. Van Esch5, J. Chelly6, D. Sanlaville7, H. van Bokhoven8, H. Ropers9, F. Laumonnier10, C. E. Schwartz11, F. Abidi11, P. S. Tarpey12, A. Whibley13, F. L. Raymond13, M. R. Stratton12, J. Fryns5, M. Peippo14, M. Partington15, A. Hackett15, P. Marynen1, G. Turner15, J. Gécz2;
1VIB, University of Leuven, Leuven, Belgium, 2Women's and Children's Hospital, Adelaide, Australia, 3Helsinki University Central Hospital, Helsinki, Finland, 4John Hunter Hospital, Newcastle, Australia, 5University Hospital Leuven, Leuven, Belgium, 6Université Paris Descartes, Paris, France, 7Necker Enfants Malades Hospital, Paris, France, 8University Medical Centre, Nijmegen, The Netherlands, 9Max Planck Institute for Molecular Genetics, Berlin, Germany, 10Centre Hospitalier Universitaire Bretonneau, Tours, France, 11JC Self Research Institute of Human Genetics, Greenwood, SC, United States, 12The Wellcome Trust Sanger Institute, Hinxton, United Kingdom, 13Cambridge Institute of Medical Research, Cambridge, United Kingdom, 14The Family Federation of Finland, Helsinki, Finland, 15The GOLD service Hunter Genetics University of Newcastle, Newcastle, Australia.

C02.2 Sporadic venous malformation is caused by somatic mutations in TIE2
M. Uebelhoer
1, V. Wouters1, N. Limaye1, L. M. Boon1,2, J. B. Mulliken3, M. Vikkula1;
1de Duve Institute, Université catholique de Louvain, Brussels, Belgium, 2Center for Vascular Anomalies, Cliniques Universitaires St-Luc, Université catholique de Louvain, Brussels, Belgium, 3Vascular Anomalies Center, Children’s Hospital, Boston, MA, United States.

C03.2 Genetic defects underlying autosomal recessive nonsyndromic hearing impairment in Turkey; three novel and five known genes
E. Kalay
1,2, R. W. J. Collin3, S. Masmoudi4, Z. M. Ahmed5, R. Çaylan6, M. Tariq7, T. Peters3, B. van der Zwaag8, S. Riazuddin5, H. Venselaar9, K. Lee10, M. A. Mosrati4, M. Hmani-Aifa4, F. P. M. Cremers2, B. Wollnik11,12, H. G. Brunner2,13, S. Riazuddin7, A. Karaguzel1, S. M. Leal10, H. Ayadi4, T. B. Friedman5, H. Kremer2,13;
1Department of Medical Biology, Faculty of Medicine, Karadeniz Technical University, Trabzon, Turkey, 2Department of Human Genetics, Radboud University Nijmegen Medical Centre, Nijmegen, The Netherlands, 3Department of Otorhinolaryngology, Radboud University Nijmegen Medical Centre, Nijmegen, The Netherlands, 4Unité Cibles pour le Diagnostic et la Thérapie, Centre de Biotechnologie, de Sfax, Tunisia, 5Laboratory of Molecular Genetics, National Institute on Deafness and Other Communication Disorder, Rockville, MD, United States, 6Department of Otorhinolaryngology, Faculty of Medicine, Karadeniz Technical University, Trabzon, Turkey, 7National Center of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan, 8Department of Pharmacology and Anatomy, Rudolf Magnus Institute of Neuroscience, University Medical Center Utrecht, Utrecht, The Netherlands, 9Center for Molecular and Biomolecular Informatics, Radboud University Nijmegen, Nijmegen, The Netherlands, 10Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, United States, 11Center for Molecular Medicine Cologne (CMMC), University of Cologne, Cologne, Germany, 12Medical Genetics Department, Istanbul Medical Faculty, Istanbul University, Istanbul, Turkey, 13Center for Molecular Life Sciences, Radboud University Nijmegen, Nijmegen, The Netherlands.

C04.2 Design, implementation and results using diagnostic oligo array-cgh
J. A. Crolla
1,2, S. Huang2, S. J. Beal2, V. Maloney2, J. C. K. Barber2;
1University of Southampton, Salisbury, United Kingdom, 2National Genetics Reference Laboratory (Wessex), Salisbury, United Kingdom.

C05.2 A high-resolution structural variation map of a human genome by next-generation, high-throughput paired-end sequencing
F. M. De La Vega
1, H. E. Peckham2, S. S. Ranade2, S. F. McLaughlin2, C. C. Lee2, Y. Fu2, Z. Zhang1, F. C. L. Hyland1, C. L. Clouser2, A. A. Antipova2, J. M. Manning2, C. L. Hendrickson2, L. Zhang2, E. T. Dimalanta2, T. D. Sokolsky2, M. W. Laptewicz2, B. E. Coleman2, J. K. Ichikawa2, J. B. Warner2, B. Li1, J. M. Kidd3, J. A. Malek4, G. L. Costa2, E. E. Eichler3, K. J. McKernan2;
1Applied Biosystems, Foster City, CA, United States, 2Applied Biosystems, Beverly, MA, United States, 3HHMI, University of Washington, Seattle, WA, United States, 4Weill Cornell Medical College in Qatar, Doha, Qatar.

15.30

C01.3 Clinical outcome and molecular investigation of Pitt-Hopkins syndrome: a series of 9 patients
L. de Pontual, Y. Mathieu, M. Rio, A. Munnich, S. Lyonnet, J. Amiel;
INSERM U-781, Department of Genetics, Necker Hospital, Paris, France, Paris, France.

C02.3* LTBP2 mutation in autosomal recessive microspherophakia with some marfanoid features
J. Desir
1, Y. Sznajer2, J. Laes3, F. Roulez4, M. J. Abramowicz1;
1Medical Genetics Department, Hopital Erasme-ULB, Brussels, Belgium, 2Medical Genetics Department, HUDERF-ULB, Brussels, Belgium, 3DNAvision, Gosselies, Belgium, 4Ophthalmologic Department, HUDERF-ULB, Brussels, Belgium.

C03.3 Thromboxane synthase mutations in an increased bone density disorder (Ghosal syndrome)
D. Geneviève
1, V. Proulle2, B. Isidor1, S. Bellais1, V. Serre1, F. Djouadi3, C. Picard4, C. Vignon-Savoye5, B. Bader-Meunier6, S. Blanche4, M. de Vernejoul7, L. Legeai-Mallet1, A. Fischer8, M. Le Merrer1, M. Dreyfus2, P. Gaussem8, A. Munnich1, V. Cormier-Daire1;
1Département de Génétique, Unité INSERM U781, Université Paris Descartes, AP-HP, Hôpital Necker-Enfants Malades, Paris, France, 2AP-HP, Laboratoire d’Hématologie, Université Paris-Sud, Hôpital Kremlin-Bicêtre, Kremlin Bicêtre, France, 3Centre National de la Recherche Scientifique UPR9078, Paris, France, 4AP-HP, Unité d’Immuno-Hématologie et de Rhumatologie Pédiatrique, Hôpital Necker-Enfants Malades, Paris, France, 5Service de Pédiatrie, Centre Hospitalier Intercommunal Le Raincy-Montfermeil, Montfermeil, France, 6AP-HP, Service d’Hématologie Pédiatrique, Hôpital Robert Debré, Paris, France, 7AP-HP, Département de Rhumatologie, Hôpital Lariboisière, Paris, France, 8AP-HP, Laboratoire d’Hématologie, Hôpital Européen Georges Pompidou, Paris, France.

C04.3 The challenge of interpreting microduplications detected by arrayCGH
C. M. A. van Ravenswaaij-Arts
, B. Leegte, T. Dijkhuizen, R. Hordijk, I. Stolte-Dijkstra, M. de Jong, M. Kerstjens-Frederikse, K. Kok, B. Sikkema-Raddatz;
Department of Genetics, University Medical Center, Groningen, The Netherlands.

C05.3 Expression analysis using deep Solexa sequencing shows major advances in robustness, resolution and inter-lab portability over microarray platforms
J. T. den Dunnen
1,2, Y. Ariyurek2, H. H. Thygesen1, E. Vreugdenhil3, J. M. Boer1, G. B. van Ommen1, P. A. C. 't Hoen1;
1Human and Clinical Gentics, Leiden, The Netherlands, 2Leiden Genome Technology Center, Leiden, The Netherlands, 3Medical Pharmacology, Leiden / Amsterdam Center for Drug Research, Leiden, The Netherlands.

15.45

C01.4 Expanding the clinical phenotype of tetrasomy 18p
C. D. Sebold
1, E. Roeder1,2, B. T. Soileau1, A. Malik1, D. Neigut2, K. Hernandez3, M. Thomas3, B. Perry4, P. Fox5, M. Semrud-Clikeman6, B. Butcher6, S. Smith7, L. O'Donnell1, K. Richards8, K. Reinker9, R. Tragus1, D. E. Hale1, J. D. Cody1;
1Chromosome 18 Clinical Research Center, San Antonio, TX, United States, 2Christus Santa Rosa Children's Hospital, San Antonio, TX, United States, 3University Health System, San Antonio, TX, United States, 4Ear Medical Group, San Antonio, TX, United States, 5UTHSCSA Research Imaging Center, San Antonio, TX, United States, 6University of Texas at Austin, Austin, TX, United States, 7University of Texas at Austin, San Antonio, TX, United States, 8Wilford Hall Medical Center, San Antonio, TX, United States, 9University of Texas Health Science Center at San Antonio, San Antonio, TX, United States.

C02.4* Novel ARVD5 gene causes autosomal dominant sudden cardiac death due to missense mutations in the TMEM43 gene
T. Young
1, N. D. Merner1, K. Hodgkinson1, A. F. Haywood1, W. McKenna2, S. Connors1, V. French1, L. Thierfelder3, P. Syrris2, P. Parfrey1;
1Memorial University, St. John's, NL, Canada, 2The Heart Hospital, London, United Kingdom, 3Max-Delbruck Centrum fur Molekulare Medizin, Berlin, Germany.

C03.4 Congenital arthrogryposis: autosomal recessive lethal congenital contractural syndrome caused by mutations in PIP5K1C and in ERBB3
G. Narkis1, E. Manor2, D. Landau2, M. Volokita1, K. Elbadour2, O. S. Birk1,2;
1National Institute for Biotechnology in the Negev, Beer-Sheva, Israel, 2Soroka Medical Center, Beer-sheva, Israel.

C04.4* Array-CGH analysis of MCA/MR patients: identification of 5 novel microdeletion syndromes
F. T. Papa
, E. Katzaki, M. A. Mencarelli, R. Caselli, V. Uliana, M. Pollazzon, K. Sampieri, I. Longo, F. Ariani, I. Meloni, F. Mari, A. Renieri;
Medical Genetics, Siena, Italy.

C05.4 Studying gene dosage imbalance in embryonic stem cells
G. Cobellis
1,2, A. Romito1, R. De Cegli1, S. Iacobacci1, A. Fedele1, D. di Bernardo1, A. Ballabio1;
1TIGEM, Napoli, Italy, 2Second University of Naples, Naples, Italy.

16.00

C01.5 Congenital nephrotic syndrome, microcephaly, trigonocephaly, polydactyly, brain and eye anomalies: a distinct autosomal recessive disorder
M. Zenker
1, O. Gross2, E. Mildenberger3, B. Albrecht4, V. Matejas1, D. Wieczorek4;
1Institute of Human Genetics, Erlangen, Germany, 2Dept. Nephrology&Rheumatology, University Hospital Goettingen, Goettingen, Germany, 3Dept. of Pediatrics, University Hospital Benjamin Franklin, Berlin, Germany, 4Institute of Human Genetics, University Hospital Essen, Essen, Germany.

C02.5* Knock-out models in mice and men suggest a proatherogenic role for USF1
P. P. Laurila
1, K. Merikanto1, J. Perttilä1, J. Saharinen1, M. Gentile1, J. Naukkarinen1, P. K. Laurila2, A. Tuomainen3, C. Ehnholm1, V. M. Olkkonen1, M. Jauhiainen1, L. Peltonen1,4,5;
1National Public Health Institute, Finland, Helsinki, Finland, 2Department of Pathology, Helsinki University Central Hospital, Helsinki, Finland, 3Institute of Dentistry, University of Helsinki, Helsinki, Finland, 4The Wellcome Trust Sanger Institute, Cambridge, United Kingdom, 5The Broad Institute of MIT and Harvard, Boston, MA, United States.

C03.5 Drastic reduction in the life span of cystatin C L68Q gene carriers due to life-style changes in the last two centuries
A. Palsdottir
1, A. Helgason2,3, S. Palsson4,5, H. T. Bjornsson6, B. T. Bragason1, S. Gretarsdottir2, U. Thorsteinsdottir2,7, E. Olafsson8,7, K. Stefansson2,7;
1Institute for Experimental Pathology, Keldur, University of Iceland, Reykjavík, Iceland, 2DeCODE Genetics, Reykjavík, Iceland, 3Department of Anthropology, University of Iceland, Reykjavik, Iceland, 4Institute of Biology, University of Iceland, Reykjavík, Iceland, 5DeCODE Genetics, Reykjavik, Iceland, 6Johns Hopkins University School of Medicine, Baltimore, MD, United States, 7Faculty of Medicine, University of Iceland, Reykjavik, Iceland, 8Department of Neurology, LSH University Hospital, Reykjavík, Iceland.

C04.5* Towards an improved genetic diagnosis of individuals with a congenital heart defects
B. Thienpont
1, L. Tranchevent2, P. Van Loo1,2, J. Breckpot1, M. Gewillig3, Y. Moureau2, K. Devriendt1;
1Center for Human Genetics, Leuven, Belgium, 2Department of Electrical Engineering, ESAT-SCD, Leuven, Belgium, 3Pediatric Cardiology Unit, Leuven, Belgium.

C05.5* A large human miRNA library screen reveals a potential role of miRNAs in the fine tuning of fibrinogen levels
A. Fort
1, C. Borel1, R. J. Fish1, S. E. Antonarakis1, M. Neerman-Arbez1,2;
1University Medical Center, Geneva, Switzerland, 2Division of Angiology and Haemostasis, University Hospital, Geneva, Switzerland.

16.15

C01.6 An undescribed phenotype associated with cranio-fronto-facio-nasal malformations, total alopecia and genital abnormalities
N. A. Akarsu
1, H. Kayserili2, I. Vargel3, Y. Alanay4, S. Candan2, G. Tuncbilek5, O. Uyguner2, S. Balci6;
1Hacettepe University, Pediatrics, Gene Mapping Laboratory, Ankara, Turkey, 2Istanbul University Medical Genetics, Istanbul, Turkey, 3Kirikkale University, Plastic and Reconstructive Surgery, Kirikkale, Turkey, 4Hacettepe University, Pediatrics, Clinical Genetics, Ankara, Turkey, 5Hacettepe University, Plastic and Reconstructive Surgery, Ankara, Turkey, 6Hacettepe University, Pediatrics, Clinical Genetics (Emeritus Member), Ankara, Turkey.

C02.6 Disruptions of highly conserved, very distant regulatory elements on either side of SOX9 are associated with Pierre Robin sequence
J. Fantes1, S. Benko2, J. Ramsay1, J. Amiel2, S. Heaney1, D. McBride1, P. Perry1, D. Kleinjan1, S. Thomas2, N. Jamshidi3, C. Gordon3, C. Golzio2, V. Abadie4, C. Ayuso5, M. Holder-Espinasse6, N. Kilpatrick3, P. Thomas3, A. Pelet2, M. Vazquez7, M. Vekemans2, A. Munnich2, P. Farlie3, H. Etchevers2, S. Lyonnet2, D. R. FitzPatrick1;
1MRC Human Genetics Unit, Edinburgh, United Kingdom, 2INSERM U-781, Hôpital Necker-Enfants Malades, Paris, France, 3Oral Health Research Group,Musculoskeletal Disorders Theme, Murdoch Children’s Research Institute, Royal Children’s Hospital, Parkville, Australia, 4Université Paris 5 René Descartes, Paris, France, 5Fundación Jiménez Díaz, Genética, Madrid, Spain, 6CHRU de Lille, Hôpital Jeanne de Flandre, Lille, France, 7Assistance Publique-Hôpitaux de Paris, Service de Chirurgie Maxillo-Faciale, Hôpital d’Enfants Armand Trousseau, Paris, France.

C03.6 Greater than 1% of Contemporary West Africans are Carriers of a Founder Mutation for Severe Recessive Type VIII OI, Which Was Presumably Brought to America with the Colonial Slave Trade and Also Occurs in African-Americans
W. A. Cabral
1, A. M. Barnes1, C. N. Rotimi2, L. Brody3, J. E. Bailey-Wilson4, F. D. Porter5, J. C. Marini1;
1Bone & Extracellular Matrix Branch, NICHD, NIH, Bethesda, MD, United States, 2National Human Genome Center, Howard University, Washington, DC, United States, 3Molecular Pathogenesis Section, Genome Technology Branch, NHGRI, NIH, Bethesda, MD, United States, 4Statistical Genetics Section, Inherited Disease Research Branch, NHGRI, NIH, Baltimore, MD, United States, 5Heritable Disorders Branch, NICHD, NIH, Bethesda, MD, United States.

C04.6* Information management for constitutional cytogenetics: tools for ArrayCGH in a clinical diagnostic context
S. W. L. A. Van Vooren
1, B. Coessens1, J. R. Vermeesch2, Y. Moreau1;
1K.U.Leuven, ESAT/SCD (SISTA), Heverlee, Belgium, 2Center for Human Genetics, Leuven University Hospital, Leuven, Belgium.

C05.6 Visualization of molecular interactions in situ, with single-molecule resolution
O. Söderberg
;
Uppsala University, Uppsala, Sweden.
  * ESHG Young Investigator Award candidates - Profiles available here